BICOB 2020:BibTeX Entries

Volume

@proceedings{BICOB2020,
  title     = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340}}

Papers

@inproceedings{BICOB2020:Identification_of_Deregulated_Transcription,
  author    = {Magali Champion and Julien Chiquet and Pierre Neuvial and Mohamed Elati and Fran\textbackslash{}c\{c\}ois Radvanyi and Etienne Birmel\textbackslash{}'e},
  title     = {Identification of Deregulated Transcription Factors Involved in Specific Bladder Cancer Subtypes},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {1--10},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/PX7P},
  doi       = {10.29007/v7qj}}

@inproceedings{BICOB2020:Ranking_Variable_Combinations_to,
  author    = {Isis Narvaez-Bandera and Wandaliz Torres-Garcia},
  title     = {Ranking Variable Combinations to Characterize Breast Cancer Subtypes using the IBIF-RF Metric},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {11--20},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/nHhd},
  doi       = {10.29007/8xwn}}

@inproceedings{BICOB2020:In_silico_library_design,
  author    = {Ankita Sahu and Dibyabhaba Pradhan and Khalid Raza and Sahar Qazi and A K Jain and Saurabh Verma},
  title     = {In silico library design, screening and MD simulation of COX-2 inhibitors for anticancer activity},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {21--32},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/6MnX},
  doi       = {10.29007/z2wx}}

@inproceedings{BICOB2020:Bifurcation_Analysis_of_Mathematical,
  author    = {Hsiu-Chuan Wei},
  title     = {Bifurcation Analysis of a Mathematical Model of Tumor Growth in MCF-7 Breast Cancer Cell Line},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {33--40},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/BphG},
  doi       = {10.29007/spj5}}

@inproceedings{BICOB2020:Classification_of_functional_Near,
  author    = {Roberto Rosas Romero and Edgar Guevara},
  title     = {Classification of functional Near Infra Red Signals with Machine Learning for Prediction of Epilepsy},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {41--48},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/5K9x},
  doi       = {10.29007/qqx8}}

@inproceedings{BICOB2020:PhGC_Machine_Learning_Based,
  author    = {Safa Shubbar and Chen Fu and Zhi Liu and Anthony Wynshaw-Boris and Qiang Guan},
  title     = {PhGC: A Machine Learning Based Workflow for Phenotype-Genotype Co-analysis on Autism},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {49--58},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/mJFF},
  doi       = {10.29007/ctfl}}

@inproceedings{BICOB2020:From_Unsupervised_Multi_Instance_Learning,
  author    = {Fardina Alam and Amarda Shehu},
  title     = {From Unsupervised Multi-Instance Learning to Identification of Near-Native Protein Structures},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {59--68},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/s9h6},
  doi       = {10.29007/pjcf}}

@inproceedings{BICOB2020:Assessing_Protein_Drug_Resistance_Due,
  author    = {Dylan Carpenter and Tess Thackray and Cecilia Kalthoff and Filip Jagodzinski},
  title     = {Assessing Protein-Drug Resistance Due to Mutations via a Rigidity Analysis in silico Approach},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {69--78},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/pDm5},
  doi       = {10.29007/7gnf}}

@inproceedings{BICOB2020:Virtual_Experimentation_Complements_Real_World,
  author    = {Andrew Smith and Glen Ropella and C. Anthony Hunt},
  title     = {Virtual Experimentation Complements Real-World Experimentation},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {79--88},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/xpkg},
  doi       = {10.29007/tlcv}}

@inproceedings{BICOB2020:Visualizing_Omics_Data_from,
  author    = {Daniel Berrios and Eric Weitz and Kirill Grigorev and Sylvain Costes and Samrawit Gebre and Afshin Beheshti},
  title     = {Visualizing Omics Data from Spaceflight Samples using the NASA GeneLab Platform},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {89--98},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/9fnJ},
  doi       = {10.29007/rh7n}}

@inproceedings{BICOB2020:Clique_Selection_and_its,
  author    = {Yuping Lu and Charles Phillips and Elissa Chesler and Michael Langston},
  title     = {Clique Selection and its Effect on Paraclique Enrichment: An Experimental Study},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {99--108},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/mDZB},
  doi       = {10.29007/3sdd}}

@inproceedings{BICOB2020:Graphical_Processing_Unit,
  author    = {Mutlu Mete and Abdullah Arslan},
  title     = {Graphical Processing Unit - Supported RNA Secondary Structure Comparison},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {109--118},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/kL8q},
  doi       = {10.29007/bhsr}}

@inproceedings{BICOB2020:Co_expression_networks_uncover_regulation,
  author    = {Pan Zhang and Bruce Southey and Sandra Rodriguez-Zas},
  title     = {Co-expression networks uncover regulation of splicing and transcription markers of disease},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {119--128},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/jSRQ},
  doi       = {10.29007/rl4h}}

@inproceedings{BICOB2020:Mining_approximate_frequent_dense,
  author    = {San Ha Seo and Saeed Salem},
  title     = {Mining approximate frequent dense modules from multiple gene expression datasets},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {129--138},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/xkbX},
  doi       = {10.29007/d87q}}

@inproceedings{BICOB2020:Analysis_of_Mutation_Bias,
  author    = {Zhixiu Lu and Michael Gilchrist and Scott Emrich},
  title     = {Analysis of Mutation Bias in Shaping Codon Usage Bias and Its Association with Gene Expression Across Species},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {139--148},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/dSTb},
  doi       = {10.29007/87r9}}

@inproceedings{BICOB2020:Multi_objective_Optimisation_of_Gene,
  author    = {Ozgur Ekim Akman and Jonathan Edward Fieldsend},
  title     = {Multi-objective Optimisation of Gene Regulatory Networks: Insights from a Boolean Circadian Clock Model},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {149--162},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/vWlB},
  doi       = {10.29007/bvbj}}

@inproceedings{BICOB2020:Convolutional_neural_net_learns,
  author    = {Nicholas Leiby and Ayaan Hossain and Howard M Salis},
  title     = {Convolutional neural net learns promoter sequence features driving transcription strength},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {163--172},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/84b4},
  doi       = {10.29007/8fmw}}

@inproceedings{BICOB2020:Epileptic_Focus_Localization_Based,
  author    = {Xuyang Zhao and Linfeng Sui and Toshihisa Tanaka and Jianting Cao and Qibin Zhao},
  title     = {Epileptic Focus Localization Based on iEEG Plot Images by Using Convolutional Neural Network},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {173--181},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/MnXs},
  doi       = {10.29007/9jmg}}

@inproceedings{BICOB2020:Exploring_Deep_Neural_Network,
  author    = {Manpriya Dua and Daniel Barbara and Amarda Shehu},
  title     = {Exploring Deep Neural Network Architectures: A Case Study on Improving Antimicrobial Peptide Recognition},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {182--191},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/sKkk},
  doi       = {10.29007/rbxj}}

@inproceedings{BICOB2020:ASPECT_an_LDA_Based_Predictive,
  author    = {Puzhou Wang},
  title     = {ASPECT, an LDA-Based Predictive Algorithm for In Vitro Selection},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {192--197},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/RxnT},
  doi       = {10.29007/vkrq}}

@inproceedings{BICOB2020:Exposure_Measurements_on_Biomimetic,
  author    = {Preethi Krishnan and Lopamudra Dutta and Andrew Smith and Glen Ropella and Ryan Kennedy and Anthony Hunt},
  title     = {Exposure Measurements on Biomimetic Lobules Using Virtual Experiments to Help Improve IVIVE},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {198--207},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/hd8b},
  doi       = {10.29007/hjfc}}

@inproceedings{BICOB2020:Measurement_of_similarity_in,
  author    = {Arun Govindaswamy and Wahhaj Farooq and Yiyang Wang and Ilyas Ustun and Daniela Raicu and Jacob Furst and Hongkyun Kim},
  title     = {Measurement of similarity in C. elegans healthspan using dynamic time warping on movement features},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {208--216},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/4CRS},
  doi       = {10.29007/gdxw}}

@inproceedings{BICOB2020:Hepatocyte_Organization_Affects_Translation,
  author    = {Lopamudra Dutta and Preethi Krishnan and Andrew Smith and Ryan Kennedy and Glen Ropella and C. Anthony Hunt},
  title     = {Hepatocyte Organization Affects the Translation of Clearance from In Vitro to In Vivo},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {217--225},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/wn8T},
  doi       = {10.29007/t4kv}}

@inproceedings{BICOB2020:Bioinformatics_analysis_of_hereditary,
  author    = {Lawrence Yu-Min Liu and Zih-Yin Lai and Min-Hsuan Lin and Yu Shih and Yung-Jen Chuang},
  title     = {Bioinformatics analysis of hereditary disease gene set to identify key modulators of myocardial remodeling during heart regeneration in zebrafish},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {226--237},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/wcCK},
  doi       = {10.29007/9p1h}}

@inproceedings{BICOB2020:Predicting_Microvascular_Invasion_of,
  author    = {Qin Yu and Geng Chen and Jiaqi Li and Xiaolong Liu and Xuegong Zhang and Haiming Lu},
  title     = {Predicting Microvascular Invasion of Hepatocellular Carcinoma by texture analysis of multi-phase MR image},
  booktitle = {Proceedings of the 12th International Conference on Bioinformatics and Computational Biology},
  editor    = {Qin Ding and Oliver Eulenstein and Hisham Al-Mubaid},
  series    = {EPiC Series in Computing},
  volume    = {70},
  pages     = {238--246},
  year      = {2020},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/q5TT},
  doi       = {10.29007/r87h}}