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Evaluation of Preprocessing Techniques for U-Net Based Automated Liver Segmentation

EasyChair Preprint no. 5328

6 pagesDate: April 18, 2021


To extract liver from medical images is a challenging task due to similar intensity values of liver with adjacent organs, various contrast levels, various noise associated with medical images and irregular shape of liver. To address these issues, it is important to preprocess the medical images, i.e., computerized tomography (CT) and magnetic resonance imaging (MRI) data prior to liver analysis and quantification. This paper investigates the impact of permutation of various preprocessing techniques for CT images, on the automated liver segmentation using deep learning, i.e., U-Net architecture. The study focuses on Hounsfield Unit (HU) windowing, contrast limited adaptive histogram equalization (CLAHE), z-score normalization, median filtering and Block-Matching and 3D (BM3D) filtering. The segmented results show that combination of three techniques; HU-windowing, median filtering and z-score normalization achieve optimal performance with Dice coefficient of 96.93%, 90.77% and 90.845 for training, validation and testing respectively.

Keyphrases: deep learning, liver segmentation, Medical Image Preprocessing, U-Net architecture

BibTeX entry
BibTeX does not have the right entry for preprints. This is a hack for producing the correct reference:
  author = {Muhammad Islam and Kaleem Nawaz Khan and Muhammad Salman Khan},
  title = {Evaluation of Preprocessing Techniques for U-Net Based Automated Liver Segmentation},
  howpublished = {EasyChair Preprint no. 5328},

  year = {EasyChair, 2021}}
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