FENICS'17: THE FENICS 2017 CONFERENCE

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Alnæs, Martin Sandve	3D visualization with FEniCS in Jupyter Notebooks FEniCS: Sustainable Software Development Practices
Augustin, Christoph	FEniCS Mechanics: A Package for Continuum Mechanics Simulations
Avazmohammadi, Reza	Identification of Mechanical Properties of 3D Myocardial Tissue: An Inverse Modeling and Optimal Experimental Design Problem
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Baelmans, Martine	Grid Independence and Manufacturability in Microchannel Heat Sink Topology Optimization
Baroli, Davide	iRANitsche: reduced assembly with a Nitsche-based reduced basis method From medical images to uncertainty quantification with FEniCS and 3D Slicer
Beex, Lars A. A.	iRANitsche: reduced assembly with a Nitsche-based reduced basis method
Blechta, Jan	FENaPack - FEniCS Navier-Stokes preconditioning package Implementation of Diffuse Interface Models in FEniCS
Bonart, Henning	Simulating Moving Contact Line Problems Using the Cahn-Hilliard-Navier-Stokes Equations
Boon, Wietse	Mixed-Dimensional Linear Elasticity with Relaxed Symmetry
Bordas, Stéphane P.A.	Uncertainty quantification for soft tissue biomechanics iRANitsche: reduced assembly with a Nitsche-based reduced basis method Functional-type two-sided a posteriori error estimates for high-order discretizations From medical images to uncertainty quantification with FEniCS and 3D Slicer
C
Cascio, Michele	MD-FEM Force Field Simulations of Particle Subjected to Dielectrophoresis Interactions
Chen, Joshua W.	Identification of Mechanical Properties of 3D Myocardial Tissue: An Inverse Modeling and Optimal Experimental Design Problem
Cotter, Colin	Automating Hybridization via Composing Abstractions
Cremades Buján, Manuel	Automated Solution of Parabolic-Elliptic Systems for Control Applications with Embedded Runge-Kutta Methods
Croci, Matteo	Geometric Multigrid in FEniCS
D
Darian, Diako	Kinetic simulation of plasma-object interaction with FEniCS
Daversin-Catty, Cécile	Towards coupled mixed dimensional finite elements in FEniCS
De Gersem, Herbert	Computationally Efficient Numerical Quadratures for the Finite Element Assembly of High-Order non-Lagrange Elements A Finite Element Approach to Computational Magnetics with Defect Correction
Deretzis, Ioannis	LIAB: a FEniCS based computational tool for laser annealing simulation MD-FEM Force Field Simulations of Particle Subjected to Dielectrophoresis Interactions
Dokken, Jørgen S.	Shape Optimization with Multiple Meshes
Dolejsi, Vit	Analytic Metric-Based Adaptation Using a Continuous Mesh Model
Drach, Andrew	Identification of Mechanical Properties of 3D Myocardial Tissue: An Inverse Modeling and Optimal Experimental Design Problem
F
Falci, Giuseppe	MD-FEM Force Field Simulations of Particle Subjected to Dielectrophoresis Interactions
Farrell, Patrick	Shape Optimization with Geometric Constraints Geometric Multigrid in FEniCS
Fauske, Vidar	3D visualization with FEniCS in Jupyter Notebooks
Feistauer, Miloslav	Optimality Of Apriori Error Estimates Of Discontinuous Galerkin Method For Elliptic Problems With Nonlinear Newton Boundary Conditions
Finsberg, Henrik	Sensitivity Analysis of Cardiac Growth Models
Fontán Muiños, Pedro	Automated Solution of Parabolic-Elliptic Systems for Control Applications with Embedded Runge-Kutta Methods
Funke, Simon W.	Shape Optimization with Multiple Meshes A new algorithmic differentiation tool (not only) for FEniCS Sensitivity Analysis of Cardiac Growth Models
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Genet, Martin	Equilibrated Warping: Finite Element Image Correlation with Mechanical Regularization
Geuzaine, Christophe	Computationally Efficient Numerical Quadratures for the Finite Element Assembly of High-Order non-Lagrange Elements Gmsh 3.0 - Gmsh goes boolean!
Ghattas, Omar	Identification of Mechanical Properties of 3D Myocardial Tissue: An Inverse Modeling and Optimal Experimental Design Problem
Gibson, Thomas	Automating Hybridization via Composing Abstractions
Goldsberry, Benjamin	Finite Element Modeling of Elastic Wave Dispersion in Pre-strained Negative Stiffness Honeycombs Using FEniCS
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Habara, Michal	Discontinuous solution of the Laplace equation in a mixed finite element method and level-set setting
Haberman, Michael	Finite Element Modeling of Elastic Wave Dispersion in Pre-strained Negative Stiffness Honeycombs Using FEniCS
Hadfield, Hugo	Multi-Level Monte Carlo for Large-scale Vibrations Problems Using FEniCS and podS podS: A Parallel Multilevel Monte Carlo Framework
Hale, Jack	Uncontainable enthusiasm: the pain and joy of Docker on HPC and cloud Uncertainty quantification for soft tissue biomechanics iRANitsche: reduced assembly with a Nitsche-based reduced basis method Functional-type two-sided a posteriori error estimates for high-order discretizations From medical images to uncertainty quantification with FEniCS and 3D Slicer
Ham, David	FInAT: Automating Optimal Code Generation for High-Order Finite Element Methods Automating Hybridization via Composing Abstractions
Hauseux, Paul	Uncertainty quantification for soft tissue biomechanics From medical images to uncertainty quantification with FEniCS and 3D Slicer
Herrmann, Marc	Total Variation Image Reconstruction on Smooth Surfaces
Hertel, Frank	From medical images to uncertainty quantification with FEniCS and 3D Slicer
Herzog, Roland	Total Variation Image Reconstruction on Smooth Surfaces
Holter, Karl Erik	Trace Constrained Problems in FEniCS
Holter, Karl Erik	Tracer transport in microvasculature: A case study on coupling 1D-3D problems in FEniCS
Homolya, Miklós	Generating matrix actions with TSFC and Loo.py FInAT: Automating Optimal Code Generation for High-Order Finite Element Methods
Hron, Jaroslav	Discontinuous solution of the Laplace equation in a mixed finite element method and level-set setting
Huet, Karim	LIAB: a FEniCS based computational tool for laser annealing simulation
J
Johansson, August	Shape Optimization with Multiple Meshes
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Kahle, Christian	Simulating Moving Contact Line Problems Using the Cahn-Hilliard-Navier-Stokes Equations
Kirby, Robert C.	Generating matrix actions with TSFC and Loo.py FInAT: Automating Optimal Code Generation for High-Order Finite Element Methods Across the great divide: composable block preconditioning from UFL
Klöckner, Andreas	Generating matrix actions with TSFC and Loo.py
Kozerke, Sebastian	Equilibrated Warping: Finite Element Image Correlation with Mechanical Regularization
Kröner, Heiko	Total Variation Image Reconstruction on Smooth Surfaces
Kuchta, Miroslav	Trace Constrained Problems in FEniCS
Kuchta, Miroslav	Tracer transport in microvasculature: A case study on coupling 1D-3D problems in FEniCS
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La Magna, Antonino	LIAB: a FEniCS based computational tool for laser annealing simulation MD-FEM Force Field Simulations of Particle Subjected to Dielectrophoresis Interactions
Labeur, Robert Jan	A High-Order Particle-Mesh Operator Splitting Approach for the Incompressible Navier-Stokes Equations
Lacko, Paul	Grid Independence and Manufacturability in Microchannel Heat Sink Topology Optimization
Landet, Tormod	Slope Limiting of Divergence Free Discontinuous Galerkin Vector Fields in the Context of Two-Phase Flows
Lee, Lik Chuan	Equilibrated Warping: Finite Element Image Correlation with Mechanical Regularization Sensitivity Analysis of Cardiac Growth Models
Lespinasse, Bobby	LIAB: a FEniCS based computational tool for laser annealing simulation
Li, David	Identification of Mechanical Properties of 3D Myocardial Tissue: An Inverse Modeling and Optimal Experimental Design Problem
Logg, Anders	Solving Poisson’s equation on the Microsoft HoloLens In memory of Hans Petter Langtangen A Space-Time Cut Finite Element Method for the Heat Equation in FEniCS
Lombardo, Salvatore Francesco	LIAB: a FEniCS based computational tool for laser annealing simulation MD-FEM Force Field Simulations of Particle Subjected to Dielectrophoresis Interactions
Lundholm, Carl	Solving Poisson’s equation on the Microsoft HoloLens A Space-Time Cut Finite Element Method for the Heat Equation in FEniCS
Luporini, Fabio	FInAT: Automating Optimal Code Generation for High-Order Finite Element Methods Loop fusion for finite element assembly in PyOP2
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Magliano, Antonino	MD-FEM Force Field Simulations of Particle Subjected to Dielectrophoresis Interactions
Maljaars, Jakob	A High-Order Particle-Mesh Operator Splitting Approach for the Incompressible Navier-Stokes Equations
Mardal, Kent-Andre	Slope Limiting of Divergence Free Discontinuous Galerkin Vector Fields in the Context of Two-Phase Flows Trace Constrained Problems in FEniCS Tracer transport in microvasculature: A case study on coupling 1D-3D problems in FEniCS
Marsic, Nicolas	Computationally Efficient Numerical Quadratures for the Finite Element Assembly of High-Order non-Lagrange Elements
May, Georg	Analytic Metric-Based Adaptation Using a Continuous Mesh Model
Mella, Hernán	Implementation of Mixed and Hybrid Formulation of the PML Method in Elastodynamics Using FEniCS
Mitchell, Lawrence	Across the great divide: composable block preconditioning from UFL
Mitusch, Sebastian	A new algorithmic differentiation tool (not only) for FEniCS
Morandini, Marco	Handling of finite rotations in Dolfin
Mortensen, Mikael	Slope Limiting of Divergence Free Discontinuous Galerkin Vector Fields in the Context of Two-Phase Flows
Mura, Joaquín	Implementation of Mixed and Hybrid Formulation of the PML Method in Elastodynamics Using FEniCS
Málek, Josef	Discontinuous solution of the Laplace equation in a mixed finite element method and level-set setting
Möller, Matthias	A High-Order Particle-Mesh Operator Splitting Approach for the Incompressible Navier-Stokes Equations
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Neumann, Johannes	Topology Optimization under Uncertainties in FEniCS
Nikitushkina, Liubov	Sensitivity Analysis of Cardiac Growth Models
Nordaas, Magne	A Space-Time Cut Finite Element Method for the Heat Equation in FEniCS
Nordaas, Magne	Solving Poisson’s equation on the Microsoft HoloLens
Nordbotten, Jan	Mixed-Dimensional Linear Elasticity with Relaxed Symmetry
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Ptashnyk, Mariya	The impact of microscopic structure on mechanical properties of plant cell walls and tissues
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Ragan-Kelley, Min	3D visualization with FEniCS in Jupyter Notebooks
Rangarajan, Ajay Mandyam	Analytic Metric-Based Adaptation Using a Continuous Mesh Model
Remacle, Jean-François	Gmsh 3.0 - Gmsh goes boolean!
Repke, Jens-Uwe	Simulating Moving Contact Line Problems Using the Cahn-Hilliard-Navier-Stokes Equations
Richardson, Chris	Uncontainable enthusiasm: the pain and joy of Docker on HPC and cloud
Rodriguez, Miguel	FEniCS Mechanics: A Package for Continuum Mechanics Simulations
Rodríguez García, Jerónimo	Automated Solution of Parabolic-Elliptic Systems for Control Applications with Embedded Runge-Kutta Methods
Rognes, Marie	Accurate Numerical Modeling of Small Collections of Cardiac Cells Towards coupled mixed dimensional finite elements in FEniCS
Roskovec, Filip	Optimality Of Apriori Error Estimates Of Discontinuous Galerkin Method For Elliptic Problems With Nonlinear Newton Boundary Conditions
Römer, Ulrich	A Finite Element Approach to Computational Magnetics with Defect Correction
S
Sacks, Michael	Simulating the Response of Bioprosthetics Heart Valve Tissues to Cyclic Loading in FEniCS Identification of Mechanical Properties of 3D Myocardial Tissue: An Inverse Modeling and Optimal Experimental Design Problem
Scalese, Silvia	MD-FEM Force Field Simulations of Particle Subjected to Dielectrophoresis Interactions
Schmidt, Stephan	Total Variation Image Reconstruction on Smooth Surfaces
Schmidt, Stephan	UFL and the Automatic Derivation of Weak and Strong Shape Derivatives Shape Optimization with Multiple Meshes
Schöps, Sebastian	A Finite Element Approach to Computational Magnetics with Defect Correction
Seguin, Brian	The impact of microscopic structure on mechanical properties of plant cell walls and tissues
Shadden, Shawn	FEniCS Mechanics: A Package for Continuum Mechanics Simulations
Shahrabi, Vahid	From medical images to uncertainty quantification with FEniCS and 3D Slicer
Sime, Nathan	Multi-Level Monte Carlo for Large-scale Vibrations Problems Using FEniCS and podS podS: A Parallel Multilevel Monte Carlo Framework
Souček, Ondřej	Discontinuous solution of the Laplace equation in a mixed finite element method and level-set setting
Sun, Tianjiao	Loop fusion for finite element assembly in PyOP2
Sáez, Esteban	Implementation of Mixed and Hybrid Formulation of the PML Method in Elastodynamics Using FEniCS
Sändig, Anna-Margarete	Optimality Of Apriori Error Estimates Of Discontinuous Galerkin Method For Elliptic Problems With Nonlinear Newton Boundary Conditions
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Tomar, Satyendra	Functional-type two-sided a posteriori error estimates for high-order discretizations
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Unwin, Juliette	Multi-Level Monte Carlo for Large-scale Vibrations Problems Using FEniCS and podS podS: A Parallel Multilevel Monte Carlo Framework
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Vasilyeva, Maria	Multiscale model reduction using GMsFEM for applied problems in heterogeneous domains
Verstraete, Armand	LIAB: a FEniCS based computational tool for laser annealing simulation
Vidal, José	Total Variation Image Reconstruction on Smooth Surfaces
Villa, Umberto	Identification of Mechanical Properties of 3D Myocardial Tissue: An Inverse Modeling and Optimal Experimental Design Problem
W
Wall, Samuel	Sensitivity Analysis of Cardiac Growth Models
Wechsung, Florian	Shape Optimization with Geometric Constraints
Wells, Garth	Multi-Level Monte Carlo for Large-scale Vibrations Problems Using FEniCS and podS podS: A Parallel Multilevel Monte Carlo Framework Uncontainable enthusiasm: the pain and joy of Docker on HPC and cloud
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Zhang, Will	Simulating the Response of Bioprosthetics Heart Valve Tissues to Cyclic Loading in FEniCS
Zhou, Yang	Grid Independence and Manufacturability in Microchannel Heat Sink Topology Optimization
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Řehoř, Martin	FENaPack - FEniCS Navier-Stokes preconditioning package Implementation of Diffuse Interface Models in FEniCS

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